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VectorBase Related Publications »
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VectorBase-Supported Publications
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| 2010 |
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Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle.
Kirkness EF, Haas BJ, Sun W, Braig HR, Perotti MA, Clark JM, Lee SH, Robertson HM, Kennedy RC, Elhaik E, Gerlach D, Kriventseva EV, Elsik CG, Graur D, Hill CA, Veenstra JA, Walenz B, Tubío JM, Ribeiro JM, Rozas J, Johnston JS, Reese JT, Popadic A, Tojo M, Raoult D, Reed DL, Tomoyasu Y, Krause E, Mittapalli O, Margam VM, Li HM, Meyer JM, Johnson RM, Romero-Severson J, Vanzee JP, Alvarez-Ponce D, Vieira FG, Aguadé M, Guirao-Rico S, Anzola JM, Yoon KS, Strycharz JP, Unger MF, Christley S, Lobo NF, Seufferheld MJ, Wang N, Dasch GA, Struchiner CJ, Madey G, Hannick LI, Bidwell S, Joardar V, Caler E, Shao R, Barker SC, Cameron S, Bruggner RV, Regier A, Johnson J, Viswanathan L, Utterback TR, Sutton GG, Lawson D, Waterhouse RM, Venter JC, Strausberg RL, Berenbaum MR, Collins FH, Zdobnov EM, Pittendrigh BR.
Proceedings of the National Academy of Science. 2010 June; doi: 10.1073/pnas.1003379107
PMID: 20566863
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A set of ontologies to drive tools for the control of vector-borne diseases.
Topalis P, Dialynas E, Mitraka E, Deliyanni E Siden-Kiamos I and Louis C J Biomed. Inform, in press.
PMID: 20363364
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A set of ontologies to drive tools for the control of vector-borne diseases.
Topalis P, Dialynas E, Mitraka E, Deliyanni E Siden-Kiamos I and Louis C Nature Preceedings doi: 10.1038/npre.2009.3464.1
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| 2009 |
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MIRO and IRbase: IT Tools for the Epidemiological Monitoring of Insecticide Resistance in Mosquito Disease Vectors.
Dialynas E, Topalis P, Vontas J, Louis C PLoS Negl Trop Dis. 2009 Jun;3(6):e465. Epub 2009 Jun23
PMID: 19547750
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Comparative genomics allows the discovery of cis-regulatory elements in mosquitoes.
Sieglaff DH, Dunn WA, Xie XS, Megy K, Marinotti O, James AA PNAS 2009 March;106(9):3053-8
PMID: 19211788
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VectorBase: a data resource for invertebrate vector genomics.
Lawson D, Arensburger P, Atkinson P, Besansky NJ, Bruggner RV,
Butler R, Campbell KS, Christophides GK, Christley S, Dialynas E,
Hammond M, Hill CA, Konopinski N, Lobo NF, MacCallum RM, Madey G,
Megy K, Meyer J, Redmond S, Severson DW, Stinson EO, Topalis P,
Birney E, Gelbart WM, Kafatos FC, Louis C, Collins FH Nucleic Acids Res. 2009 Jan;37(Database issue):583-7
PMID: 19028744
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| 2008 |
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How can ontologies help vector biology?
Topalis P, Lawson D, Collins FH, Louis C Trends Parasitol. 2008 Jun;24(6):249-52. Epub 2008 Apr24
PMID: 18440275
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Anatomical ontologies of mosquitoes and ticks, and their web browsers in VectorBase.
Topalis P, Tzavlaki C, Vestaki K, Dialynas E, Sonenshine DE, Butler R,
Bruggner RV, Stinson EO, Collins FH, Louis C. Insect Mol Biol. 2008 Feb;17(1):87-9
PMID: 18237287
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Genomic resources for invertebrate vectors of human pathogens, and the role of VectorBase.
Megy K, Hammond M, Lawson D, Bruggner RV, Birney E, Collins FH. Infect Genet Evol. 2008 Jan 3.
PMID: 18262474
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| 2007 |
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Genome sequence of Aedes aegypti, a major arbovirus vector.
Nene V, Wortman JR, Lawson D, Haas B, Kodira C, Tu ZJ, Loftus B, Xi Z, Megy K, Grabherr M,
Ren Q, Zdobnov EM, Lobo NF, Campbell KS, Brown SE, Bonaldo MF, Zhu J, Sinkins SP, Hogenkamp DG,
Amedeo P, Arensburger P, Atkinson PW, Bidwell S, Biedler J, Birney E, Bruggner RV, Costas J,
Coy MR, Crabtree J, Crawford M, Debruyn B, Decaprio D, Eiglmeier K, Eisenstadt E, El-Dorry H,
Gelbart WM, Gomes SL, Hammond M, Hannick LI, Hogan JR, Holmes MH, Jaffe D, Johnston JS,
Kennedy RC, Koo H, Kravitz S, Kriventseva EV, Kulp D, Labutti K, Lee E, Li S, Lovin DD, Mao C,
Mauceli E, Menck CF, Miller JR, Montgomery P, Mori A, Nascimento AL, Naveira HF, Nusbaum C,
O'leary S, Orvis J, Pertea M, Quesneville H, Reidenbach KR, Rogers YH, Roth CW, Schneider JR,
Schatz M, Shumway M, Stanke M, Stinson EO, Tubio JM, Vanzee JP, Verjovski-Almeida S, Werner D,
White O, Wyder S, Zeng Q, Zhao Q, Zhao Y, Hill CA, Raikhel AS, Soares MB, Knudson DL, Lee NH,
Galagan J, Salzberg SL, Paulsen IT, Dimopoulos G, Collins FH, Birren B, Fraser-Liggett CM, Severson DW., Science. 2007 Jun 22;316(5832):1718-23.
PMID: 17510324
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Analysis of 14 BAC sequences from the Aedes aegypti genome: A benchmark for genome annotation and assembly
Lobo NF, Campbell KS, Thaner D, deBruyn B, Koo H, Gelbart WM, Loftus BJ, Severson DW, Collins FH., Genome Biol. 2007 May 22;8(5):R88.
PMID: 17519023
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VectorBase: A home for invertebrate vectors of human pathogens.
Lawson D, Arensburger P, Atkinson P, Besansky NJ, Bruggner RV, Butler R, Campbell KS, Christophides GK, Christley S, Dialynas E, Emmert D, Hammond M, Hill CA, Kennedy RC, Lobo NF, MacCallum MR, Madey G, Megy K, Redmond S, Russo S, Severson DW, Stinson EO, Topalis P, Zdobnov EM, Birney E, Gelbart WM, Kafatos FC, Louis C, Collins F., Nucleic Acids Res. 2007 Jan;35(Database issue):D503-5
PMID: 17145709
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Update of the Anopheles gambiae PEST genome assembly.
Sharakhova, M.V., Hammond, M.P., Lobo, N.F., Krzywinski, J., Unger, M., Hillenmeyer, M.E., Bruggner, R.V., Birney, E., and Collins, F.H., Genome Biol. 2007 Jan 8;8(1):R5
PMID: 17210077
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| 2006 |
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Biochemical, molecular and functional characterization of PISCF-allatostatin, a regulator of juvenile hormone biosynthesis in the mosquito Aedes aegypti
Li, Y., Hernandez-Martinez, S., Fernandez, F., Mayoral, J.G., Topalis, P., Priestap, H., Perez, M., Navare, A., and Noriega, F.G., J Biol Chem. 2006 Sep 12;
PMID: 16968697
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Isolation and characterization of the RanGAP gene in the mosquito Aedes aegypti
Cha SJ, Lobo N, Debruyn B, Severson DW., DNA Seq. 2006 Jun;17(3):223-30
PMID: 17286051
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High efficiency germ line transformation of mosquitoes
Lobo NF, Clayton JR, Fraser MJ, Kafatos FC, Collins FH., Nat Protoc. 2006;1(3):1312-7.
PMID: 17406416
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| 2005 |
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Functional genomic analysis of midgut epithelial responses in Anopheles during Plasmodium invasion.
Vlachou D, Schlegelmilch T, Christophides GK, Kafatos FC., Curr Biol. 2005 Jul 12;15(13):1185-95
PMID: 16005290
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AnoEST: Toward A. gambiae functional genomics.
Kriventseva EV, Koutsos AC, Blass C, Kafatos FC, Christophides GK, Zdobnov EM., Genome Res. 2005 Jun;15(6):893-9
PMID: 15899967
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| 2004 |
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AnoXcel: A database of Anopheles gambiae proteins oriented to the bench scientist.
Ribeiro, J.M.C., Topalis, P. and Louis, C., Insect Mol. Biol. 2004 Oct;13(5), 449-457
PMID: 15373803
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