VBGE/Microarrays

From VectorBase Help System

The arrays listed below are either

Currently mapped

Mapped to the current genome assembly and available as "permanent" contigview tracks in the VectorBase genome browser and also through BioMart.

To be mapped

The array's reporters are being mapped and will be made public soon

Contents 1 A. gambiae 1.1 Currently mapped 1.2 To be mapped 2 A. aegypti 2.1 Currently mapped 2.2 To be mapped

[edit] A. gambiae

[edit] Currently mapped

• EMBL/Christophides 20k MMC1
• EMBL/Christophides 4k (versions 1.0 and 2.0)
• EMBL/Christophides MMC2
• Liverpool/Ranson Detox array v1
• Liverpool/Ranson Detox array v2
• Affymetrix Anopheles/Plasmodium chip
• JHSPH/Dimopoulos AG_GAMBER (GEO GPL4579)

[edit] To be mapped

• JHSPH/Dimopoulos GAMBER_AG (GEO GPL5001)
• Liverpool/Ranson Detox array v3
• Agilent mosquito array (commercial)
• Tiling array GPL3955
• "New" tiling array (more details to come)

[edit] A. aegypti

[edit] Currently mapped

• Notre Dame/Severson TIGRTC array
• UCR/Gill clone-based array
• Liverpool/Ranson Detox array v1

[edit] To be mapped

• Liverpool/Ranson Detox array v2
• JHSPH/Dimopoulos AEG_V1 (GEO)