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PopulationData

Welcom to the PopulationData section of VectorBase. In Stage 1 of PopulationDat provided a relational database of population genomic data from collections made by the UC Davis Vector Genetic Laboratory and UCLA Malaria Research Group in relation to geographic information. In Stage 2, we expand the database to include other taxa (Workbench) as well as meteorology and land cover data near collection sites.

Contents:

Karyotype Data
Microsatellite Data
Species, molecular forms, karyotype, microsatellite genotype data and Chromosome Images
Data Views
Summary data
Geographic Information
Collection site coordinates, GoogleMaps API, Google Earth Layers of land cover and genotype distributions.
Documents
Tutorials, Data Structure, Naming Conventions
Population Data Workbench
Database and tools for working projects
links to development site

News

[6.19.2009] A custom DAS (Distributed annotation system) for chromosome inversion is availble. Tutorial
[3.5.2009] GoogleMaps API is updated.
[12.9.2008] PopGenBase group meeting at ASTMH '08 annual meeting in New Orleans. [Handout(PDF)]
[10.14.2008] About Ag PopGenBase
In October 2008 VectorBase initiated a plan for the development of a web-based data repository for information about the population genomics of invertebrate vectors of human disease. This endeavor is being pursued ...[more]

Contributions

UC Davis
UCLA

PopGenBase @ VectorBase.org
VectorBase Last Updated February 11th, 2010
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