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    Sequence and assembly

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    • Contigs
      Track showing underlying assembly contigs.
    • Sequence
      Track showing sequence in both directions. Only displayed at 1Kb and below.
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      Simple features

        Genes and transcripts

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          • Genes
            This track comprises multiple analyses; RNA genes produced by filtering predictions from tRNAscan-SE v1.23.; Updates to the gene models from the VectorBase community.; RNA genes produced by filtering alignments of Rfam (release 12.1) covariance models.; Genes annotated with MAKER by VectorBase.

          mRNA and protein alignments

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          • Rfam Models
            Covariance models from Rfam (release 12.1), aligned to the genome with 'cmscan' from the Infernal suite of programs.
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            Comparative genomics

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              Repeat regions

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                Information and decorations

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                • %GC
                  Shows percentage of Gs & Cs in region
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                  Shows the scalebar
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                  Shows the length of the region being displayed
                • Alignment Difference Legend
                • Gene Legend
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                • Information ()
                  Details of the region shown in the image

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