Annotated Transcriptomes

We provide access to annotated, assembled EST and/or RNAseq transcript sequences. These datasets can be queried from Search and BLAST. The keywords for Search are InterPro IDs (e.g., IPR002067). In BLAST select the "Assembled transcriptomes" data set(s) to run a job.

Species Title
Aedes albopictus Boes et al (2014) Aedes albopictus transcriptome shotgun assembly
Anopheles albimanus Hittinger et al. (2009) Anopheles RNA-seq transcript assemblies
Anopheles albimanus Martinez-Barnetche et al (2012) Anopheles albimanus adult female transcriptome
Anopheles aquasalis Costa-da-Silva, Marinotti, Ribeiro et al (2014) Anopheles aquasalis transcriptome shotgun assembly
Anopheles arabiensis Hittinger et al. (2009) Anopheles RNA-seq transcript assemblies
Anopheles dirus Hittinger et al. (2009) Anopheles RNA-seq transcript assemblies
Anopheles farauti Hittinger et al. (2009) Anopheles RNA-seq transcript assemblies
Anopheles freeborni Hittinger et al. (2009) Anopheles RNA-seq transcript assemblies
Anopheles funestus Crawford et al (2010) Anopheles funestus RNA-seq transcriptome
Anopheles quadriannulatus Hittinger et al. (2009) Anopheles RNA-seq transcript assemblies
Anopheles quadrimaculatus Hittinger et al. (2009) Anopheles RNA-seq transcript assemblies
Anopheles quadrimaculatus Desjardins et al (2015) Anopheles quadrimaculatus transcriptome shotgun assembly
Anopheles stephensi Pandey et al (2014) Anopheles stephensi RNA-seq transcriptome
Anopheles stephensi Hittinger et al. (2009) Anopheles RNA-seq transcript assemblies
Ixodes ricinus Cramaro et al (2015) Ixodes ricinus transcriptome shotgun assembly
Ixodes ricinus Schwarz et al (2014) Ixodes ricinus transcriptome shotgun assembly
Ixodes ricinus Schwarz et al (2013) Ixodes ricinus transcriptome shotgun assembly
Ixodes ricinus Kotsyfakis et al (2015) Ixodes ricinus transcriptome shotgun assembly
Ixodes scapularis Egekwu et al (2014) Ixodes scapularis female synganglion transcriptome
Musca domestica Li et al (2015) Musca domestica mixed stage RNA-seq transcriptome
Rhodnius prolixus Ribiero et al (2014) Rhodnius prolixus transcriptome shotgun assembly
Stomoxys calcitrans Benoit et al (2015) Stomoxys calcitrans transcriptome shotgun assembly
Triatoma dimidiata Santiago et al (2015) Triatoma dimidiata salivary glands transcriptome shotgun assembly
Triatoma dimidiata Lavore et al (2017) Triatoma dimidiata mixed stages transcriptome assembly
Triatoma infestans Schwarz et al (2014) Triatoma infestans transcriptome shotgun assembly
Triatoma infestans Lavore et al (2017) Triatoma infestans mixed stages transcriptome assembly
Triatoma infestans Calderon-Fernandez et al (2016) Triatoma infestans integument transcriptome shotgun assembly
Triatoma pallidipennis Hernandez-Vargas et al (2016) Triatoma pallidipennis salivary glands transcriptome shotgun assembly
Triatoma pallidipennis Lavore et al (2017) Triatoma pallidipennis mixed stages transcriptome assembly