Ixodida mitochondrial genome sequences


This section provides the user with a compilation of mtDNA sequences for species of the subfamilies Ixodidae and Argasidae, as submitted to the NCBI nucleic acid sequence database by different authors. Although this list is updated regularly, some species may be absent at the time of your search.

You may click on a specific mitochondrial locus or on a species name to access a list of all available sequences.
Last update: August 2014 - 384 species / 9755 GenBank entries


Family Ixodidae


ATP6 ATP8 COX1 COX2 COX3 CYTB 
l-rRNA ND1 ND2 ND3 ND4 ND4L 
ND5 ND6 s-rRNA tRNA-Ala tRNA-Arg tRNA-Asn 
tRNA-Asp tRNA-Cys tRNA-Gln tRNA-Glu tRNA-Gly tRNA-His 
tRNA-Ile tRNA-Leu tRNA-Lys tRNA-Met tRNA-Phe tRNA-Pro 
tRNA-Ser tRNA-Thr tRNA-Trp tRNA-Tyr tRNA-Val  
The clickable figure can also lead you directly to the respective gene (also found in the upper table). The map is a composite approximation for all anopheline mtDNAs and each line represents approximately 4000 base pairs. Turquoise: tRNA genes, dark blue: rDNA, red: other genes. The direction of transcription is indicated as from left to right (above the line) or from right to left (below the line).
Species
Amblyomma americanum Amblyomma antillorum Amblyomma argentinae
Amblyomma aureolatum Amblyomma auricularium Amblyomma boeroi
Amblyomma brasiliense Amblyomma cajennense Amblyomma calcaratum
Amblyomma coelebs Amblyomma crassum Amblyomma darwini
Amblyomma dissimile Amblyomma dubitatum Amblyomma elaphense
Amblyomma extraoculatum Amblyomma fimbriatum Amblyomma fuscum
Amblyomma geayi Amblyomma geoemydae Amblyomma glauerti
Amblyomma goeldii Amblyomma hebraeum Amblyomma humerale
Amblyomma imitator Amblyomma incisum Amblyomma latum
Amblyomma limbatum Amblyomma longirostre Amblyomma maculatum
Amblyomma multipunctum Amblyomma naponense Amblyomma neumanni
Amblyomma nitidum Amblyomma nodosum Amblyomma oblongoguttatum
Amblyomma ovale Amblyomma pacae Amblyomma parkeri
Amblyomma parvitarsum Amblyomma parvum Amblyomma pattoni
Amblyomma pecarium Amblyomma pilosum Amblyomma pseudoconcolor
Amblyomma pseudoparvum Amblyomma rhinocerotis Amblyomma romitii
Amblyomma rotundatum Amblyomma sabanerae Amblyomma scalpturatum
Amblyomma scutatum Amblyomma sp. 1 LB-2013 Amblyomma sp. 12296545F
Amblyomma sp. 12296546M Amblyomma sp. 2 LB-2013 Amblyomma sp. 3 LB-2013
Amblyomma sp. A MDL-2014 Amblyomma sp. B MDL-2014 Amblyomma sp. IBSP 7118
Amblyomma sp. IBSP 7611CB Amblyomma sp. LB-2004 Amblyomma sp. LB-2013
Amblyomma sp. MHNCI 1243 Amblyomma sp. MJM-2013 Amblyomma sp. MO-2012
Amblyomma sp. PARAG123654 Amblyomma sp. SAH-2013 Amblyomma sp. Texasa21
Amblyomma sp. UG Amblyomma sp. USNTC 107518 Amblyomma sp. USNTC 118044
Amblyomma sp. USNTC 118150(IX) Amblyomma sp. USNTC 118150(X) Amblyomma sp. USNTC 119956
Amblyomma sp. USNTC 122344 Amblyomma sp. USNTC 6792 Amblyomma sparsum
Amblyomma sphenodonti Amblyomma tapirellum Amblyomma testudinarium
Amblyomma tigrinum Amblyomma triguttatum Amblyomma triste
Amblyomma tuberculatum Amblyomma varanense Amblyomma variegatum
Amblyomma varium Amblyomma vikirri Amblyomma williamsi
Bothriocroton concolor Bothriocroton glebopalma Bothriocroton hydrosauri
Bothriocroton oudemansi Bothriocroton undatum Culex annulirostris
Culex bitaeniorhynchus Culex brevipalpis Culex cornutus
Culex coronator Culex declarator Culex gaufini
Culex modestus Culex nigripalpus Culex palpalis
Culex pipiens Culex pipiens molestus Culex pipiens pallens
Culex pipiens pipiens Culex pseudovishnui Culex quinquefasciatus
Culex restuans Culex sitiens Culex tarsalis
Culex torrentium Culex tritaeniorhynchus Culex univittatus
Dermacentor albipictus Dermacentor andersoni Dermacentor everestianus
Dermacentor halli Dermacentor hunteri Dermacentor imitans
Dermacentor marginatus Dermacentor nitens Dermacentor niveus
Dermacentor nuttalli Dermacentor occidentalis Dermacentor parumapertus
Dermacentor reticulatus Dermacentor rhinocerinus Dermacentor silvarum
Dermacentor steini Dermacentor taiwanensis Dermacentor variabilis
Haemaphysalis bispinosa Haemaphysalis campanulata Haemaphysalis concinna
Haemaphysalis cornigera Haemaphysalis cretica Haemaphysalis doenitzi
Haemaphysalis elliptica Haemaphysalis flava Haemaphysalis formosensis
Haemaphysalis humerosa Haemaphysalis hystricis Haemaphysalis inermis
Haemaphysalis japonica Haemaphysalis japonica douglasi Haemaphysalis juxtakochi
Haemaphysalis kitaokai Haemaphysalis leachi Haemaphysalis lemuris
Haemaphysalis leporispalustris Haemaphysalis longicornis Haemaphysalis mageshimaensis
Haemaphysalis megaspinosa Haemaphysalis parva Haemaphysalis pentalagi
Haemaphysalis phasiana Haemaphysalis punctaleachi Haemaphysalis punctata
Haemaphysalis qinghaiensis Haemaphysalis sp. LB-2013 Haemaphysalis sp. MVB-2002
Haemaphysalis sulcata Haemaphysalis wellingtoni Haemaphysalis yeni
Hyalomma aegyptium Hyalomma anatolicum Hyalomma anatolicum anatolicum
Hyalomma asiaticum Hyalomma asiaticum asiaticum Hyalomma asiaticum kozlovi
Hyalomma detritum Hyalomma dromedarii Hyalomma hussaini
Hyalomma lusitanicum Hyalomma marginatum Hyalomma marginatum marginatum
Hyalomma marginatum rufipes Hyalomma truncatum Ixodes abrocomae
Ixodes acutitarsus Ixodes affinis Ixodes amarali
Ixodes angustus Ixodes arboricola Ixodes ariadnae
Ixodes asanumai Ixodes auritulus Ixodes bakeri
Ixodes banksi Ixodes brunneus Ixodes canisuga
Ixodes columnae Ixodes cookei Ixodes cordifer
Ixodes cornuatus Ixodes dampfi Ixodes downsi
Ixodes fecialis Ixodes frontalis Ixodes gibbosus
Ixodes granulatus Ixodes hexagonus Ixodes hirsti
Ixodes holocyclus Ixodes jellisoni Ixodes kingi
Ixodes kopsteini Ixodes lasallei Ixodes lemuris
Ixodes lividus Ixodes longiscutatus Ixodes loricatus
Ixodes luciae Ixodes minor Ixodes monospinosus
Ixodes muris Ixodes myrmecobii Ixodes neotomae
Ixodes neuquenensis Ixodes nipponensis Ixodes nuttallianus
Ixodes ovatus Ixodes pacificus Ixodes pararicinus
Ixodes pavlovskyi Ixodes persulcatus Ixodes philipi
Ixodes pilosus Ixodes redikorzevi Ixodes ricinus
Ixodes rubicundus Ixodes scapularis Ixodes sculptus
Ixodes sigelos Ixodes signatus Ixodes simplex
Ixodes sp. A MDL-2014 Ixodes sp. B MDL-2014 Ixodes sp. C MDL-2014
Ixodes sp. CAM-2010 Ixodes sp. ETBM026-11 Ixodes sp. I MO-2013
Ixodes sp. II MO-2013 Ixodes spinipalpis Ixodes stilesi
Ixodes tanuki Ixodes tasmani Ixodes trianguliceps
Ixodes trichosuri Ixodes turdus Ixodes uriae
Ixodes vespertilionis Ixodes woodi Nosomma monstrosum
Rhipicentor bicornis Rhipicentor nuttalli Rhipicephalus annulatus
Rhipicephalus appendiculatus Rhipicephalus australis Rhipicephalus bursa
Rhipicephalus camicasi Rhipicephalus compositus Rhipicephalus decoloratus
Rhipicephalus evertsi Rhipicephalus evertsi evertsi Rhipicephalus evertsi mimeticus
Rhipicephalus geigyi Rhipicephalus guilhoni Rhipicephalus haemaphysaloides
Rhipicephalus haemaphysaloides haemaphysaloides Rhipicephalus kochi Rhipicephalus kohlsi
Rhipicephalus leporis Rhipicephalus maculatus Rhipicephalus microplus
Rhipicephalus muhsamae Rhipicephalus pravus Rhipicephalus pulchellus
Rhipicephalus pumilio Rhipicephalus punctatus Rhipicephalus pusillus
Rhipicephalus rossicus Rhipicephalus sanguineus Rhipicephalus sanguineus complex sp. ME-2010
Rhipicephalus sanguineus complex sp. ME-2011 Rhipicephalus sanguineus group sp. KM-2005 Rhipicephalus simus
Rhipicephalus sp. 1 sensu Dantas-Torres et al. (20 Rhipicephalus sp. CAS35 Rhipicephalus sp. Morphotype 1
Rhipicephalus sp. Morphotype 2 Rhipicephalus sp. Morphotype 3 Rhipicephalus sp. Morphotype 4
Rhipicephalus sp. MRM-2013 Rhipicephalus sp. USNTC-No RML Rhipicephalus sp. USNTC-RML 112497
Rhipicephalus sp. USNTC-RML 112497b Rhipicephalus sp. USNTC-RML 116659 Rhipicephalus sp. USNTC-RML 116662
Rhipicephalus sp. USNTC-RML 116662b Rhipicephalus sp. USNTC-RML 116662c Rhipicephalus sp. USNTC-RML 116680
Rhipicephalus sp. USNTC-RML 116693 Rhipicephalus sp. USNTC-RML 116693b Rhipicephalus sp. USNTC-RML 116693c
Rhipicephalus sp. USNTC-RML 116831 Rhipicephalus sp. USNTC-RML 123810 Rhipicephalus sp. USNTC-RML 123810b
Rhipicephalus sp. USNTC-RML 123810c Rhipicephalus sp. USNTC-RML 123810d Rhipicephalus sp. USNTC-RML 124013
Rhipicephalus sp. USNTC-RML 90371 Rhipicephalus sp. USNTC-RML 90373 Rhipicephalus sp. USNTC-RML 90373b
Rhipicephalus sulcatus Rhipicephalus turanicus Rhipicephalus zambeziensis
Rhipicephalus zumpti   


Family Argasidae


ATP6 ATP8 COX1 COX2 COX3 CYTB 
l-rRNA ND1 ND2 ND3 ND4 ND4L 
ND5 ND6 s-rRNA tRNA-Ala tRNA-Arg tRNA-Asn 
tRNA-Asp tRNA-Cys tRNA-Gln tRNA-Glu tRNA-Gly tRNA-His 
tRNA-Ile tRNA-Leu tRNA-Lys tRNA-Met tRNA-Phe tRNA-Pro 
tRNA-Ser tRNA-Thr tRNA-Trp tRNA-Tyr tRNA-Val  
The clickable figure can also lead you directly to the respective gene (also found in the upper table). The map is a composite approximation for all anopheline mtDNAs and each line represents approximately 4000 base pairs. Turquoise: tRNA genes, dark blue: rDNA, red: other genes. The direction of transcription is indicated as from left to right (above the line) or from right to left (below the line).
Species
Antricola delacruzi Antricola guglielmonei Antricola marginatus
Antricola mexicanus Argas africolumbae Argas brevipes
Argas japonicus Argas keiransi Argas lagenoplastis
Argas miniatus Argas monachus Argas monolakensis
Argas neghmei Argas persicus Argas polonicus
Argas reflexus Argas robertsi Argas sp. J7224
Argas sp. SpringbokSA-QMS95171 Argas vulgaris Argas walkerae
Carios capensis Carios fonsecai Carios marinkellei
Carios mimon Carios peropteryx Carios rondoniensis
Carios sawaii Carios vespertilionis Nothoaspis amazoniensis
Nothoaspis reddelli Ornithodoros brasiliensis Ornithodoros coriaceus
Ornithodoros costalis Ornithodoros erraticus Ornithodoros gurneyi
Ornithodoros kairouanensis Ornithodoros marocanus Ornithodoros merionesi
Ornithodoros moubata Ornithodoros normandi Ornithodoros occidentalis
Ornithodoros parkeri Ornithodoros peruvianus Ornithodoros porcinus
Ornithodoros porcinus domesticus Ornithodoros porcinus porcinus Ornithodoros quilinensis
Ornithodoros rioplatensis Ornithodoros rondoniensis Ornithodoros rostratus
Ornithodoros rupestris Ornithodoros savignyi Ornithodoros sonrai
Ornithodoros sp. AJM-2011b Ornithodoros sp. AJM-2012 Ornithodoros sp. MBL-2013
Ornithodoros sp. ML-2011 Ornithodoros tholozani Ornithodoros turicata
Ornithodoros viguerasi Otobius megnini