Data files

VectorBase is committed to a new release every two months. A list of changes and the latest data (e.g., current gene sets) relative to a specific release can be found in our release notes. Current and archived data are available for download below (an FAQ provides a summary of the file types).

Displaying 1 - 11 of 11
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Operations
File Organism Size Type Description
Anopheles-minimus-MINIMUS1_CONTIGS_AminM1.fa.gz Anopheles minimus 56.95 MB Contigs MINIMUS1 strain genomic contig sequences, AminM1 assembly.
Anopheles-minimus-MINIMUS1_SCAFFOLDS_AminM1.fa.gz Anopheles minimus 55.86 MB Scaffolds MINIMUS1 strain genomic scaffold sequences, AminM1 assembly, softmasked using RepeatMasker, Dust, and TRF.
Anopheles-minimus-MINIMUS1_PEPTIDES_AminM1.8.fa.gz Anopheles minimus 4.42 MB Peptides MINIMUS1 strain peptide sequences, AminM1.8 geneset.
Anopheles-minimus-MINIMUS1_TRANSCRIPTS_AminM1.8.fa.gz Anopheles minimus 8.23 MB Transcripts MINIMUS1 strain transcript sequences, AminM1.8 geneset.
Anopheles-minimus-MINIMUS1_BASEFEATURES_AminM1.8.gff3.gz Anopheles minimus 1.87 MB Basefeatures MINIMUS1 strain AminM1.8 geneset in GFF3 format.
Anopheles-minimus-MINIMUS1_BASEFEATURES_AminM1.8.gtf.gz Anopheles minimus 1.62 MB Basefeatures MINIMUS1 strain AminM1.8 geneset in GTF (v2.2) format.
Anopheles-minimus-MINIMUS1_CONTIG2SCAFFOLD_AminM1.agp.gz Anopheles minimus 155.19 KB Contig to Scaffold mapping AGP (v2.0) file relating contigs to scaffolds for the Anopheles minimus A strain, AminM1 assembly.
Anopheles-minimus-MINIMUS1_MAPPINGS_AminM1.3-AminM1.4.txt Anopheles minimus 18.41 KB ID Mapping Stable ID mapping between genesets AminM1.3 and AminM1.4 (RNA gene update)
Anopheles-minimus-MINIMUS1_REPEATS.lib Anopheles minimus 290.24 KB RepeatMasker library RepeatMasker library file of repeats for Anopheles minimus, MINIMUS1 strain.
Anopheles-minimus-MINIMUS1_REPEATFEATURES_AminM1.gff3.gz Anopheles minimus 2.75 MB Repeat features MINIMUS1 strain AminM1 repeat features (RepeatMasker, Dust, TRF) in GFF3 format.
Anopheles-minimus_EXPR-STATS_VB-2018-12.txt.gz Anopheles minimus 847.65 KB Expression statistics Tab-delimited, log2 transformed expression values, gene x condition: mean, variance and number of replicates. The means are no longer median-subtracted.