Data files

VectorBase is committed to a new release every two months. A list of changes and the latest data (e.g., current gene sets) relative to a specific release can be found in our release notes. Current and archived data are available for download below (an FAQ provides a summary of the file types).

Displaying 1 - 15 of 15
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Operations
File Organism Size Type Description
Glossina-morsitans-Yale_CONTIGS_GmorY1.fa.gz Glossina morsitans 114.29 MB Contigs Yale strain genomic contig sequenes, GmorY1 assembly.
Glossina-morsitans-Yale_SCAFFOLDS_GmorY1.fa.gz Glossina morsitans 106.02 MB Scaffolds Yale strain genomic scaffold sequences, GmorY1 assembly, softmasked using RepeatMasker, Dust, and TRF.
Glossina-morsitans_TRACE_2008-11.fa.gz Glossina morsitans 271.35 MB Reads Submitted trace reads as of November 2007.
Glossina-morsitans-Yale_PEPTIDES_GmorY1.9.fa.gz Glossina morsitans 4.32 MB Peptides Yale strain peptide sequences, GmorY1.9 geneset.
Glossina-morsitans-Yale_TRANSCRIPTS_GmorY1.9.fa.gz Glossina morsitans 9.59 MB Transcripts Yale strain transcript sequences, GmorY1.9 geneset.
Glossina-morsitans-Yale_BASEFEATURES_GmorY1.9.gff3.gz Glossina morsitans 2.39 MB Basefeatures Yale strain GmorY1.9 geneset in GFF3 format.
Glossina-morsitans-Yale_BASEFEATURES_GmorY1.9.gtf.gz Glossina morsitans 1.89 MB Basefeatures Yale strain GmorY1.9 geneset in GTF (v2.2) format.
Glossina-morsitans_EST-CLIPPED_2012-12.fa.gz Glossina morsitans 16.83 MB ESTs Publicly submitted EST/cDNAs as of December 2012 with ends trimmed for poly A|T sequences.
Glossina-morsitans_EST-RAW_2012-12.fa.gz Glossina morsitans 16.88 MB Raw Publicly submitted EST/cDNAs as of December 2012.
Glossina-morsitans-Yale_CONTIG2SCAFFOLD_GmorY1.agp.gz Glossina morsitans 400.97 KB Contig to Scaffold mapping AGP (v2.0) file relating contigs to scaffolds for the Glossina morsitans Yale strain, GmorY1 assembly.
Glossina-morsitans-Yale_MAPPINGS_GmorY1.5-GmorY1.6.txt Glossina morsitans 27.36 KB ID Mapping Stable ID mapping between genesets GmorY1.5 and GmorY1.6 (RNA gene update)
Glossina-morsitans-Yale_MODIFICATIONS_GmorY1.0-GmorY1.1.txt Glossina morsitans 411.05 KB ID Mapping Yale strain gene prediction stable identifier mapping from the preliminary GmorY1.0 to release GmorY1.1 geneset
Glossina-morsitans-Yale_REPEATS.lib Glossina morsitans 1.4 MB RepeatMasker library RepeatMasker library file of repeats for Glossina morsitans, Yale strain.
Glossina-morsitans-Yale_REPEATFEATURES_GmorY1.gff3.gz Glossina morsitans 18.32 MB Repeat features Yale strain GmorY1 repeat features (RepeatMasker, Dust, TRF) in GFF3 format.
Glossina-morsitans_EXPR-STATS_VB-2018-12.txt.gz Glossina morsitans 1.51 MB Expression statistics Tab-delimited, log2 transformed expression values, gene x condition: mean, variance and number of replicates. The means are no longer median-subtracted.