Anopheles-arabiensis-Dongola_CONTIGS_AaraD1.fa.gz
Anopheles arabiensis
65.1 MB
Contigs
Dongola strain genomic contig sequences, AaraD1 assembly.
Anopheles-arabiensis-Dongola_SCAFFOLDS_AaraD1.fa.gz
Anopheles arabiensis
65.25 MB
Scaffolds
Dongola strain genomic scaffold sequences, AaraD1 assembly, softmasked using RepeatMasker, Dust, and TRF.
Anopheles-arabiensis-Dongola_PEPTIDES_AaraD1.10.fa.gz
Anopheles arabiensis
4.56 MB
Peptides
Dongola strain peptide sequences, AaraD1.10 geneset.
Anopheles-arabiensis-Dongola_TRANSCRIPTS_AaraD1.10.fa.gz
Anopheles arabiensis
9.39 MB
Transcripts
Dongola strain transcript sequences, AaraD1.10 geneset.
Anopheles-arabiensis-Dongola_BASEFEATURES_AaraD1.10.gff3.gz
Anopheles arabiensis
2.11 MB
Basefeatures
Dongola strain AaraD1.10 geneset in GFF3 format.
Anopheles-arabiensis-Dongola_BASEFEATURES_AaraD1.10.gtf.gz
Anopheles arabiensis
1.75 MB
Basefeatures
Dongola strain AaraD1.10 geneset in GTF (v2.2) format.
Anopheles-arabiensis-Hittinger_TRANSCRIPTOME_1.0.fa.gz
Anopheles arabiensis
3.04 MB
Assembled transcriptome
72049 assembled RNAseq transcripts generated by Hittinger et al. (2010).
Anopheles-arabiensis-Dongola_CONTIG2SCAFFOLD_AaraD1.agp.gz
Anopheles arabiensis
258.12 KB
Contig to Scaffold mapping
AGP (v2.0) file relating contigs to scaffolds for the Anopheles arabiensis Dongola strain, AaraD1 assembly.
Anopheles-arabiensis-Dongola_MAPPINGS_AaraD1.4-AaraD1.5.txt
Anopheles arabiensis
10.82 KB
ID Mapping
Stable ID mapping between genesets AaraD1.4 and AaraD1.5 (RNA gene update)
Anopheles-arabiensis-Dongola_REPEATS.lib
Anopheles arabiensis
323.53 KB
RepeatMasker library
RepeatMasker library file of repeats for Anopheles arabiensis, Dongola strain.
Anopheles-arabiensis-Dongola_REPEATFEATURES_AaraD1.gff3.gz
Anopheles arabiensis
4.73 MB
Repeat features
Dongola strain AaraD1 repeat features (RepeatMasker, Dust, TRF) in GFF3 format.
Anopheles-arabiensis_EXPR-STATS_VB-2019-02.txt.gz
Anopheles arabiensis
807.03 KB
Expression statistics
Tab-delimited, log2 transformed expression values, gene x condition: mean, variance and number of replicates. The means are no longer median-subtracted.