Data files

VectorBase is committed to a new release every two months. A list of changes and the latest data (e.g., current gene sets) relative to a specific release can be found in our release notes. Current and archived data are available for download below (an FAQ provides a summary of the file types).

Displaying 1 - 12 of 12
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Operations
File Organism Size Type Description
Anopheles-darlingi-Coari_CONTIGS_AdarC3.fa.gz Anopheles darlingi 41.53 MB Contigs Coari strain genomic contig sequences, AdarC3 assembly.
Anopheles-darlingi-Coari_SCAFFOLDS_AdarC3.fa.gz Anopheles darlingi 41.48 MB Scaffolds Coari strain genomic scaffold sequences, AdarC3 assembly, softmasked using RepeatMasker, Dust, and TRF.
Anopheles-darlingi-Coari_PEPTIDES_AdarC3.8.fa.gz Anopheles darlingi 3.86 MB Peptides Coari strain peptide sequences, AdarC3.8 geneset.
Anopheles-darlingi-Coari_TRANSCRIPTS_AdarC3.8.fa.gz Anopheles darlingi 5.88 MB Transcripts Coari strain transcript sequences, AdarC3.8 geneset.
Anopheles-darlingi-Coari_BASEFEATURES_AdarC3.8.gff3.gz Anopheles darlingi 1.75 MB Basefeatures Coari strain AdarC3.8 geneset in GFF3 format.
Anopheles-darlingi-Coari_BASEFEATURES_AdarC3.8.gtf.gz Anopheles darlingi 1.33 MB Basefeatures Coari strain AdarC3.8 geneset in GTF (v2.2) format.
Anopheles-darlingi_EST-CLIPPED_2012-12.fa.gz Anopheles darlingi 881.54 KB ESTs Publicly submitted EST/cDNAs as of December 2012 with ends trimmed for poly A|T sequences.
Anopheles-darlingi_EST-RAW_2012-12.fa.gz Anopheles darlingi 980.14 KB Raw Publicly submitted EST/cDNAs as of December 2012.
Anopheles-darlingi-Coari_CONTIG2SCAFFOLD_AdarC3.agp.gz Anopheles darlingi 99.17 KB Contig to Scaffold mapping AGP (v2.0) file relating contigs to scaffolds for the Anopheles darlingi Coari strain, AdarC3 assembly.
Anopheles-darlingi-Coari_MAPPINGS_AdarC3.3-AdarC3.4.txt Anopheles darlingi 5.9 KB ID Mapping Stable ID mapping between genesets AdarC3.3 and AdarC3.4 (RNA gene update)
Anopheles-darlingi-Coari_REPEATS.lib Anopheles darlingi 73.79 KB RepeatMasker library RepeatMasker library file of repeats for Anopheles darlingi, Coari strain.
Anopheles-darlingi-Coari_REPEATFEATURES_AdarC3.gff3.gz Anopheles darlingi 2.36 MB Repeat features Coari strain AdarC3 repeat features (RepeatMasker, Dust, TRF) in GFF3 format.