Data files

VectorBase is committed to a new release every two months. A list of changes and the latest data (e.g., current gene sets) relative to a specific release can be found in our release notes. Current and archived data are available for download below (an FAQ provides a summary of the file types).

Displaying 1 - 10 of 10
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Operations
File Organism Size Type Description
Anopheles-christyi-ACHKN1017_CONTIGS_AchrA1.fa.gz Anopheles christyi 52.51 MB Contigs ACHKN1017 strain genomic contig sequences, AchrA1 assembly.
Anopheles-christyi-ACHKN1017_SCAFFOLDS_AchrA1.fa.gz Anopheles christyi 52.55 MB Scaffolds ACHKN1017 strain genomic scaffold sequences, AchrA1 assembly, softmasked using RepeatMasker, Dust, and TRF.
Anopheles-christyi-ACHKN1017_PEPTIDES_AchrA1.7.fa.gz Anopheles christyi 3.78 MB Peptides ACHKN1017 strain peptide sequences, AchrA1.7 geneset.
Anopheles-christyi-ACHKN1017_TRANSCRIPTS_AchrA1.7.fa.gz Anopheles christyi 5.95 MB Transcripts ACHKN1017 strain transcript sequences, AchrA1.7 geneset.
Anopheles-christyi-ACHKN1017_BASEFEATURES_AchrA1.7.gff3.gz Anopheles christyi 2.13 MB Basefeatures ACHKN1017 strain AchrA1.7 geneset in GFF3 format.
Anopheles-christyi-ACHKN1017_BASEFEATURES_AchrA1.7.gtf.gz Anopheles christyi 1.28 MB Basefeatures ACHKN1017 strain AchrA1.7 geneset in GTF (v2.2) format.
Anopheles-christyi-ACHKN1017_CONTIG2SCAFFOLD_AchrA1.agp.gz Anopheles christyi 284.78 KB Contig to Scaffold mapping AGP (v2.0) file relating contigs to scaffolds for the Anopheles christyi ACHKN1017, AchrA1 assembly.
Anopheles-christyi-ACHKN1017_MAPPINGS_AchrA1.3-AchrA1.4.txt Anopheles christyi 6.34 KB ID Mapping Stable ID mapping between genesets AchrA1.3 and AchrA1.4 (RNA gene update)
Anopheles-christyi-ACHKN1017_REPEATS.lib Anopheles christyi 189.72 KB RepeatMasker library RepeatMasker library file of repeats for Anopheles christyi, ACHKN1017 strain.
Anopheles-christyi-ACHKN1017_REPEATFEATURES_AchrA1.gff3.gz Anopheles christyi 3.81 MB Repeat features ACHKN1017 strain AchrA1 repeat features (RepeatMasker, Dust, TRF) in GFF3 format.