Data files

VectorBase is committed to a new release every two months. A list of changes and the latest data (e.g., current gene sets) relative to a specific release can be found in our release notes. Current and archived data are available for download below (an FAQ provides a summary of the file types).

Displaying 1 - 10 of 10
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Operations
File Organism Size Type Description
Anopheles-maculatus-maculatus3_CONTIGS_AmacM1.fa.gz Anopheles maculatus 40.12 MB Contigs maculatus3 strain genomic contigs sequences, AmacM1 assembly.
Anopheles-maculatus-maculatus3_SCAFFOLDS_AmacM1.fa.gz Anopheles maculatus 40.43 MB Scaffolds maculatus3 strain genomic scaffolds sequences, AmacM1 assembly, softmasked using RepeatMasker, Dust, and TRF.
Anopheles-maculatus-maculatus3_PEPTIDES_AmacM1.5.fa.gz Anopheles maculatus 3.58 MB Peptides maculatus3 strain peptide sequences, AmacM1.5 geneset.
Anopheles-maculatus-maculatus3_TRANSCRIPTS_AmacM1.5.fa.gz Anopheles maculatus 5.38 MB Transcripts maculatus3 strain transcript sequences, AmacM1.5 geneset.
Anopheles-maculatus-maculatus3_BASEFEATURES_AmacM1.5.gff3.gz Anopheles maculatus 2.75 MB Basefeatures maculatus3 strain AmacM1.5 geneset in GFF3 format.
Anopheles-maculatus-maculatus3_BASEFEATURES_AmacM1.5.gtf.gz Anopheles maculatus 1.36 MB Basefeatures maculatus3 strain AmacM1.5 geneset in GTF (v2.2) format.
Anopheles-maculatus-maculatus3_CONTIG2SCAFFOLD_AmacM1.agp.gz Anopheles maculatus 559.25 KB Contig to Scaffold mapping AGP (v2.0) file relating contigs to scaffolds for the Anopheles maculatus maculatus3 strain, AmacM1 assembly.
Anopheles-maculatus-b-maculatus3_MAPPINGS_AmacM1.3-AmacM1.4.txt Anopheles maculatus 5.56 KB ID Mapping Stable ID mapping between genesets AmacM1.3 and AmacM1.4 (RNA gene update)
Anopheles-maculatus-maculatus3_REPEATS.lib Anopheles maculatus 2.53 KB RepeatMasker library RepeatMasker library file of repeats for Anopheles maculatus, maculatus3 strain.
Anopheles-maculatus-maculatus3_REPEATFEATURES_AmacM1.gff3.gz Anopheles maculatus 2.92 MB Repeat features maculatus3 strain AmacM1 repeat features (RepeatMasker, Dust, TRF) in GFF3 format.