Data files

VectorBase is committed to a new release every two months. A list of changes and the latest data (e.g., current gene sets) relative to a specific release can be found in our release notes. Current and archived data are available for download below (an FAQ provides a summary of the file types).

Displaying 1 - 10 of 10
Double-click species to show assemblies
Operations
File Organism Size Type Description
Glossina-pallidipes-IAEA_CONTIGS_GpalI1.fa.gz Glossina pallidipes 103.32 MB Contigs IAEA strain genomic contig sequences, GpalI1 assembly.
Glossina-pallidipes-IAEA_SCAFFOLDS_GpalI1.fa.gz Glossina pallidipes 103.3 MB Scaffolds IAEA strain genomic scaffold sequences, GpalI1 assembly, softmasked using RepeatMasker, Dust, and TRF.
Glossina-pallidipes-IAEA_PEPTIDES_GpalI1.7.fa.gz Glossina pallidipes 4.98 MB Peptides IAEA strain peptide sequences, GpalI1.7 geneset.
Glossina-pallidipes-IAEA_TRANSCRIPTS_GpalI1.7.fa.gz Glossina pallidipes 12.65 MB Transcripts IAEA strain transcript sequences, GpalI1.7 geneset.
Glossina-pallidipes-IAEA_BASEFEATURES_GpalI1.7.gff3.gz Glossina pallidipes 2.8 MB Basefeatures IAEA strain GpalI1.7 geneset in GFF3 format.
Glossina-pallidipes-IAEA_BASEFEATURES_GpalI1.7.gtf.gz Glossina pallidipes 2.54 MB Basefeatures IAEA strain GpalI1.7 geneset in GTF (v2.2) format.
Glossina-pallidipes-IAEA_CONTIG2SCAFFOLD_GpalI1.agp.gz Glossina pallidipes 155.04 KB Contig to Scaffold mapping AGP (v2.0) file relating contigs to scaffolds for the Glossina pallidipes IAEA strain, GpalI1.2 assembly.
Glossina-pallidipes-IAEA_MAPPINGS_GpalI1.3-GpalI1.4.txt Glossina pallidipes 21.99 KB ID Mapping Stable ID mapping between genesets GpalI1.3 and GpalI1.4 (RNA gene update)
Glossina-pallidipes-IAEA_REPEATS.lib Glossina pallidipes 1.36 MB RepeatMasker library RepeatMasker library file of repeats for Glossina pallidipes, IAEA strain.
Glossina-pallidipes-IAEA_REPEATFEATURES_GpalI1.gff3.gz Glossina pallidipes 17.14 MB Repeat features IAEA strain GpalI1 repeat features (RepeatMasker, Dust, TRF) in GFF3 format.