Data files

VectorBase is committed to a new release every two months. A list of changes and the latest data (e.g., current gene sets) relative to a specific release can be found in our release notes. Current and archived data are available for download below (an FAQ provides a summary of the file types).

Displaying 1 - 4 of 4
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Operations
File Organism Size Type Description
Stomoxys-calcitrans-USDA_CONTIGS_ScalU1.fa.gz Stomoxys calcitrans 237.83 MB Contigs USDA strain genome contig sequences, ScalU1 assembly.
Stomoxys-calcitrans-USDA_SCAFFOLDS_ScalU1.fa.gz Stomoxys calcitrans 254.86 MB Scaffolds USDA strain genomic scaffolds sequences, ScalU1 assembly, softmasked using RepeatMasker, Dust, and TRF.
Stomoxys-calcitrans-USDA_CONTIG2SCAFFOLD_ScalU1.agp.gz Stomoxys calcitrans 3.03 MB Contig to Scaffold mapping AGP (v2.0) file relating contigs to scaffolds for the Stomoxys calcitrans USDA strain, ScalU1.1 assembly.
Stomoxys-calcitrans-USDA_REPEATFEATURES_ScalU1.gff3.gz Stomoxys calcitrans 49.32 MB Repeat features USDA strain ScalU1 repeat features (RepeatMasker, Dust, TRF) in GFF3 format.