Data files

VectorBase is committed to a new release every two months. A list of changes and the latest data (e.g., current gene sets) relative to a specific release can be found in our release notes. Current and archived data are available for download below (an FAQ provides a summary of the file types).

Displaying 1 - 50 of 72
Operations
File Organism Size Type Description
Aedes-aegypti-Liverpool_MAPPINGS_AaegL3.5-AaegL5.1.txt Aedes aegypti 1.11 MB ID Mapping Stable ID mapping between genesets AaegL3.5 and AaegL5.1
Aedes-aegypti-Liverpool_MAPPINGS_AaegL3.3-AaegL3.4.txt Aedes aegypti 104.44 KB ID Mapping Stable ID mapping between genesets AaegL3.3 and AaegL3.4 (RNA gene update)
Aedes-aegypti-Liverpool_MODIFICATIONS_AaegL2.2-AaegL3.1-ncRNA.txt Aedes aegypti 61.66 KB ID Mapping Liverpool strain gene prediction stable identifier mapping for ncRNA from the AaegL2.2 to AaegL3.1 geneset
Aedes-albopictus-Foshan_MAPPINGS_AaloF1.1-AaloF1.2.txt Aedes albopictus 37.02 KB ID Mapping Stable ID mapping between genesets AaloF1.1 and AaloF1.2 (RNA gene update)
Anopheles-albimanus-STECLA_MAPPINGS_AalbS2.1-AalbS2.2.txt Anopheles albimanus 7.67 KB ID Mapping Stable ID mapping between genesets AalbS2.1 and AalbS2.2 (RNA gene update)
Anopheles-arabiensis-Dongola_MAPPINGS_AaraD1.4-AaraD1.5.txt Anopheles arabiensis 10.82 KB ID Mapping Stable ID mapping between genesets AaraD1.4 and AaraD1.5 (RNA gene update)
Anopheles-atroparvus-EBRO_MAPPINGS_AatrE1.3-AatrE1.4.txt Anopheles atroparvus 10.66 KB ID Mapping Stable ID mapping between genesets AatrE1.3 and AatrE1.4 (RNA gene update)
Anopheles-christyi-ACHKN1017_MAPPINGS_AchrA1.3-AchrA1.4.txt Anopheles christyi 6.34 KB ID Mapping Stable ID mapping between genesets AchrA1.3 and AchrA1.4 (RNA gene update)
Anopheles-coluzzii-Mali-NIH_MAPPINGS_AcolM1.3-AcolM1.4.txt Anopheles coluzzii 18.97 KB ID Mapping Stable ID mapping between genesets AcolM1.3 and AcolM1.4 (RNA gene update)
Anopheles-culicifacies-A-37_MAPPINGS_AculA1.3-AculA1.4.txt Anopheles culicifacies A 13.73 KB ID Mapping Stable ID mapping between genesets AculA1.3 and AculA1.4 (RNA gene update)
Anopheles-darlingi-Coari_MAPPINGS_AdarC3.3-AdarC3.4.txt Anopheles darlingi 5.9 KB ID Mapping Stable ID mapping between genesets AdarC3.3 and AdarC3.4 (RNA gene update)
Anopheles-dirus-WRAIR2_MAPPINGS_AdirW1.3-AdirW1.4.txt Anopheles dirus 11.25 KB ID Mapping Stable ID mapping between genesets AdirW1.3 and AdirW1.4 (RNA gene update)
Anopheles-epiroticus-Epiroticus2_MAPPINGS_AepiE1.3-AepiE1.4.txt Anopheles epiroticus 11.92 KB ID Mapping Stable ID mapping between genesets AepiE1.3 and AepiE1.4 (RNA gene update)
Anopheles-farauti-FAR1_MAPPINGS_AfarF2.1-AfarF2.2.txt Anopheles farauti 10.73 KB ID Mapping Stable ID mapping between genesets AfarF2.1 and AfarF2.2 (RNA gene update)
anopheles_farauti_unresolved_transcripts_2015_06.txt Anopheles farauti 1.29 KB Transcript projection The stable IDs of unprojected transcripts which fulfill the following criteria, and thus represented credible genes on the old assembly: * protein_features > 0 * orthologs...
anopheles_farauti_README_2015_06.txt Anopheles farauti 7.38 KB Transcript projection In VectorBase release 1506, Anopheles farauti genes were projected from assembly version 1 (GCA_000473445.1) to assembly version 2 (GCA_000473445.2). This README file describes...
anopheles_farauti_report_2015_06.txt Anopheles farauti 2.18 MB Transcript projection Description of the fate of every transcript in the old assembly, along with statistics to judge the quality and quantity of evidence. Columns: * transcript: stable ID * status:...
anopheles_farauti_summary_2015_06.txt Anopheles farauti 472 bytes Transcript projection A summary of the number of transcripts that could and could not be projected.
Anopheles-funestus-FUMOZ_MAPPINGS_AfunF1.4-AfunF1.5.txt Anopheles funestus 7.56 KB ID Mapping Stable ID mapping between genesets AfunF1.4 and AfunF1.5 (RNA gene update)
Anopheles-gambiae-PEST_MAPPINGS_AgamP4.4-AgamP4.5.txt Anopheles gambiae 31.85 KB ID Mapping Stable ID mapping between genesets AgamP4.4 and AgamP4.5 (RNA gene update)
Anopheles-gambiae-PEST_MODIFICATIONS_AgamP3.8-AgamP4.1-ncRNA.txt Anopheles gambiae 60.59 KB ID Mapping PEST strain gene prediction stable identifier mapping for ncRNAs from AgamP3.8 to AgamP4.1.
Anopheles-maculatus-b-maculatus3_MAPPINGS_AmacM1.3-AmacM1.4.txt Anopheles maculatus 5.56 KB ID Mapping Stable ID mapping between genesets AmacM1.3 and AmacM1.4 (RNA gene update)
Anopheles-melas-CM1001059_A_MAPPINGS_AmelC2.2-AmelC2.3.txt Anopheles melas 8.6 KB ID Mapping Stable ID mapping between genesets AmelC2.2 and AmelC2.3 (RNA gene update)
anopheles_melas_unresolved_transcripts_2015_06.txt Anopheles melas 238 bytes Transcript projection The stable IDs of unprojected transcripts which fulfill the following criteria, and thus represented credible genes on the old assembly: * protein_features > 0 * orthologs...
anopheles_melas_README_2015_06.txt Anopheles melas 7.38 KB Transcript projection In VectorBase release 1506, Anopheles melas genes were projected from assembly version 1 (GCA_000473525.1) to assembly version 2 (GCA_000473525.2). This README file describes the...
anopheles_melas_report_2015_06.txt Anopheles melas 2.87 MB Transcript projection Description of the fate of every transcript in the old assembly, along with statistics to judge the quality and quantity of evidence. Columns: * transcript: stable ID * status:...
anopheles_melas_summary_2015_06.txt Anopheles melas 472 bytes Transcript projection A summary of the number of transcripts that could and could not be projected.
Anopheles-merus-MAF_MAPPINGS_AmerM2.2-AmerM2.3.txt Anopheles merus 9.65 KB ID Mapping Stable ID mapping between genesets AmerM2.2 and AmerM2.3 (RNA gene update)
anopheles_merus_unresolved_transcripts_2015_06.txt Anopheles merus 1.56 KB Transcript projection The stable IDs of unprojected transcripts which fulfill the following criteria, and thus represented credible genes on the old assembly: * protein_features > 0 * orthologs...
anopheles_merus_README_2015_06.txt Anopheles merus 7.37 KB Transcript projection In VectorBase release 1506, Anopheles merus genes were projected from assembly version 1 (GCA_000473845.1) to assembly version 2 (GCA_000473845.2). This README file describes the...
anopheles_merus_report_2015_06.txt Anopheles merus 2.29 MB Transcript projection Description of the fate of every transcript in the old assembly, along with statistics to judge the quality and quantity of evidence. Columns: * transcript: stable ID * status:...
anopheles_merus_summary_2015_06.txt Anopheles merus 474 bytes Transcript projection A summary of the number of transcripts that could and could not be projected.
Anopheles-minimus-MINIMUS1_MAPPINGS_AminM1.3-AminM1.4.txt Anopheles minimus 18.41 KB ID Mapping Stable ID mapping between genesets AminM1.3 and AminM1.4 (RNA gene update)
Anopheles-quadriannulatus-SANGWE_MAPPINGS_AquaS1.4-AquaS1.5.txt Anopheles quadriannulatus 9.65 KB ID Mapping Stable ID mapping between genesets AquaS1.4 and AquaS1.5 (RNA gene update)
Anopheles-sinensis-China_MAPPINGS_AsinC2.1-AsinC2.2.txt Anopheles sinensis 15.77 KB ID Mapping Stable ID mapping between genesets AsinC2.1 and AsinC2.2 (RNA gene update)
Anopheles-sinensis-SINENSIS_MAPPINGS_AsinS2.1-AsinS2.2.txt Anopheles sinensis 11.8 KB ID Mapping Stable ID mapping between genesets AsinS2.1 and AsinS2.2 (RNA gene update)
anopheles_sinensis_unresolved_transcripts_2015_06.txt Anopheles sinensis 5.5 KB Transcript projection The stable IDs of unprojected transcripts which fulfill the following criteria, and thus represented credible genes on the old assembly: * protein_features > 0 * orthologs...
anopheles_sinensis_README_2015_06.txt Anopheles sinensis 7.38 KB Transcript projection In VectorBase release 1506, Anopheles sinensis genes were projected from assembly version 1 (GCA_000472065.1) to assembly version 2 (GCA_000472065.2). This README file describes...
anopheles_sinensis_report_2015_06.txt Anopheles sinensis 2.75 MB Transcript projection Description of the fate of every transcript in the old assembly, along with statistics to judge the quality and quantity of evidence. Columns: * transcript: stable ID * status:...
anopheles_sinensis_summary_2015_06.txt Anopheles sinensis 478 bytes Transcript projection A summary of the number of transcripts that could and could not be projected.
Anopheles-stephensi-Indian_MAPPINGS_AsteI2.2-AsteI2.3.txt Anopheles stephensi 15.09 KB ID Mapping Stable ID mapping between genesets AsteI2.2 and AsteI2.3 (RNA gene update)
Anopheles-stephensi-SDA-500_MAPPINGS_AsteS1.3-AsteS1.4.txt Anopheles stephensi 18.3 KB ID Mapping Stable ID mapping between genesets AsteS1.3 and AsteS1.4 (RNA gene update)
Anopheles_stephensi_MAPPINGS_AsteS1.2_AsteI2.2.txt Anopheles stephensi 688.95 KB ID Mapping Bidirectional mapping of transcript stable identifiers between the SDA-500 and Indian strains, genesets AsteS1.2 and AsteI2.2. The mapping is based on a projection between the...
Biomphalaria-glabrata-BB02_MAPPINGS_BglaB1.4-BglaB1.5.txt Biomphalaria glabrata 109.62 KB ID Mapping Stable ID mapping between genesets BglaB1.4 and BglaB1.5 (RNA gene update)
Cimex-lectularius-Harlan_MAPPINGS_ClecH1.2-ClecH1.3.txt Cimex lectularius 62.26 KB ID Mapping Stable ID mapping between genesets ClecH1.2 and ClecH1.3 (RNA gene update)
Culex-quinquefasciatus-Johannesburg_MAPPINGS_CpipJ2.2-CpipJ2.3.txt Culex quinquefasciatus 58.3 KB ID Mapping Stable ID mapping between genesets CpipJ2.2 and CpipJ2.3 (RNA gene update)
Culex-quinquefasciatus-Johannesburg_MODIFICATIONS_CpipJ1.4-CpipJ2.1-ncRNA.txt Culex quinquefasciatus 325.01 KB ID Mapping Johannesburg strain gene prediction stable identifier mapping for ncRNAs from CpipJ1.4 to CpipJ2.1.
Glossina-austeni-TTRI_MAPPINGS_GausT1.3-GausT1.4.txt Glossina austeni 22.06 KB ID Mapping Stable ID mapping between genesets GausT1.3 and GausT1.4 (RNA gene update)
Glossina-brevipalpis-IAEA_MAPPINGS_GbreI1.3-GbreI1.4.txt Glossina brevipalpis 13.71 KB ID Mapping Stable ID mapping between genesets GbreI1.3 and GbreI1.4 (RNA gene update)
Glossina-fuscipes-IAEA_MAPPINGS_GfusI1.3-GfusI1.4.txt Glossina fuscipes 23.02 KB ID Mapping Stable ID mapping between genesets GfusI1.3 and GfusI1.4 (RNA gene update)

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