Developmental series (Koutsos et al., 2007) | Expression Browser

The first VectorBase release as part of the new VEuPathDB is ready for review in beta. Please try our new look and infrastructure.

Name	Developmental series (Koutsos et al., 2007)
Species	Anopheles gambiae
Experimental factors	DevelopmentalStage:Age
Statistical tests	ANOVA Neighbour t-test
Description	Seven different Anopheles gambiae developmental stages (from embryo to adult) are profiled using the MMC1 EST array. The larval samples are time-based (rather than instar-based). The expression ratios are calculated with respect to a standard reference sample in channel 2. The ratios can not be interpreted as up- or down-regulated. They may only be compared relative to each other.
Authors	Koutsos AC, Blass C, Meister S, Schmitt S, Soares MB, Collins FC, Benes V, Zdobnov E, Kafatos FC, Christophides GK
Affiliations	European Molecular Biology Laboratory, Heidelberg, Germany. Division of Cellular and Molecular Biology, Imperial College London, London, UK. Department of Pediatrics, University of Iowa State, Iowa, USA. Center for Tropical Disease Research and Training, University of Notre Dame, Indiana, USA.
Accessions	ArrayExpress: E-TABM-186
PubMed ID	17563388

Microarrays used

Microarray	Description
EMBL A. gambiae MMC1 20k v1.0	MMC1 is a spotted cDNA microarray. It includes a total of 18,760 sequenced Anopheles EST clones prepared from two immune competent cell lines (Dimopoulos et al., 2000; Dimopoulos et al., 2001) and pooled mosquito developmental stages and adult mosquito heads (G. K. Christophides, unpublished). ArrayExpress: A-MEXP-225

Hybridisations

37 items found, displaying 1 to 20.[First/Prev] 1, 2 [Next/Last]

37 items found, displaying 1 to 20.[First/Prev] 1, 2 [Next/Last]

You are here