Bioinformatics Resource for Invertebrate Vectors of Human Pathogens
We are excited to announce that VectorBase and EuPathDB are now one bioinformatic resource center. See the press release and our letter to the community to learn more.
RNA-Seq Experiment Translational regulation in the midgut during falciparum infection (Mead et al., 2012)
NameTranslational regulation in the midgut during falciparum infection (Mead et al., 2012)
SpeciesAnopheles gambiae
Experimental factorsMaterialType:DiseaseState
Statistical testsANOVA
DescriptionThe association of transcripts with polyribosomes (polysomes) in actively translating Anopheles gambiae. Midguts dissected 22-26 hours post blood meals was used.
AuthorsMead EA, Li M, Tu Z, Zhu J
AffiliationsDepartment of Biochemistry, Virginia Tech, Blacksburg, VA 24061, USA.
Accessions GEO: GSE38707 SRA: SRP013741
PubMed ID 22857387
Search expression data from this experiment
Genesets used
Geneset Description
Anopheles gambiae AgamP4.3 transcripts The AgamP4.3 update was derived from the publication Long non-coding RNA discovery across the genus anopheles reveals conserved secondary structures within and beyond the Gambiae complex by Jenkins et al, 2015 (PMID:25903279) Genes: 13,793 Protein-coding genes: 13,007 Transcripts: 15,656 Protein-coding transcripts:14,870

Sequencing Runs
18 items found, displaying all items.
Name Samples
GSM948510.s1.e1.ampl GSM948510.s1
GSM948504.s1.e1.ampl GSM948504.s1
GSM948498.s1.e1.ampl GSM948498.s1
GSM948509.s1.e1.ampl GSM948509.s1
GSM948503.s1.e1.ampl GSM948503.s1
GSM948497.s1.e1.ampl GSM948497.s1
GSM948494.s1.e1.ampl GSM948494.s1
GSM948506.s1.e1.ampl GSM948506.s1
GSM948500.s1.e1.ampl GSM948500.s1
GSM948508.s1.e1.ampl GSM948508.s1
GSM948502.s1.e1.ampl GSM948502.s1
GSM948496.s1.e1.ampl GSM948496.s1
GSM948493.s1.e1.ampl GSM948493.s1
GSM948505.s1.e1.ampl GSM948505.s1
GSM948499.s1.e1.ampl GSM948499.s1
GSM948495.s1.e1.ampl GSM948495.s1
GSM948507.s1.e1.ampl GSM948507.s1
GSM948501.s1.e1.ampl GSM948501.s1
18 items found, displaying all items.