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RNA-Seq Experiment Anaplasma phagocytophilum infection in Tick cells (Villar et al., 2015)
NameAnaplasma phagocytophilum infection in Tick cells (Villar et al., 2015)
SpeciesIxodes scapularis
Experimental factorsDiseaseState
Statistical testsANOVA
DescriptionIxodes scapularis ISE6 cells infected with Anaplasma phagocytophilum human NY18 isolate and uninfected (control) were sequenced for comparison. Cultured cells were sampled at 7 days post-infection to calculated percentage of cells infected with A. phagocytophilum.
AuthorsVillar M, Ayllón N, Alberdi P, Moreno A et al.
AffiliationsSaBio. Instituto de Investigación en Recursos Cinegéticos IREC-CSIC-UCLM-JCCM, Ronda de Toledo s/n, 13005 Ciudad Real, Spain Departamento de Química Orgánica, Facultad de Ciencias y Tecnologías Químicas, Universidad de Castilla-La Mancha, 13071 Ciudad Real, Spain; The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Midlothian EH25 9RG, UK The Pirbright Institute, Ash Road, Pirbright, Woking, GU24 0NF, UK; Department of Veterinary Pathobiology, Center for Veterinary Health Sciences, Oklahoma State University, Stillwater, OK 74078
Accessions GEO: GSE68881 SRA: SRP058346
PubMed ID 26424601
Search expression data from this experiment
Genesets used
Geneset Description
Ixodes scapularis IscaW1.4 transcripts Wikel strain IscaW1.4 geneset.

Sequencing Runs
4 items found, displaying all items.
Name Samples
GSM1684998.s1.e1.ampl GSM1684998.s1
GSM1684999.s1.e1.ampl GSM1684999.s1
GSM1685000.s1.e1.ampl GSM1685000.s1
GSM1685001.s1.e1.ampl GSM1685001.s1
4 items found, displaying all items.