Bioinformatics Resource for Invertebrate Vectors of Human Pathogens
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RNA-Seq Experiment Forest vs. domestic form females (McBride et al., 2014)
NameForest vs. domestic form females (McBride et al., 2014)
SpeciesAedes aegypti
Experimental factorsStrainOrLine
Statistical testsANOVA
DescriptionAntennal transcript expression was compared between domestic (human-preferring) and forest (animal-preferring) female Aedes aegypti colonies to investigate the underlying genetics of prey preference. http://www.ncbi.nlm.nih.gov/bioproject/PRJNA233429
AuthorsMcBride CS, Baier F, Omondi AB, Spitzer SA, Lutomiah J, Sang R, Ignell R, Vosshall LB
AffiliationsLaboratory of Neurogenetics and Behavior, The Rockefeller University, New York, New York 10065, USA [2] Howard Hughes Medical Institute, 1230 York Avenue, New York, New York 10065, USA. Laboratory of Neurogenetics and Behavior, The Rockefeller University, New York, New York 10065, USA. Unit of Chemical Ecology, Department of Plant Protection Biology, Swedish University of Agricultural Sciences, Box 102, Sundsvägen 14, 230 53 Alnarp, Sweden. Center for Virus Research, Kenya Medical Research Institute, PO Box 54840 - 00200, Off Mbagathi Way, Nairobi, Kenya.
Accessions SRA: SRP035216
PubMed ID 25391959
Search expression data from this experiment
Genesets used
Geneset Description
Aedes aegypti AaegL5.1 transcripts LVP_AGWG strain AaegL5.1 geneset.

Sequencing Runs
16 items found, displaying all items.
Name Samples
K14_Domestic_1.amplification K14_Domestic_1.s1
K14_Domestic_2.amplification K14_Domestic_2.s1
K18_Forest_1.amplification K18_Forest_1.s1
K18_Forest_2.amplification K18_Forest_2.s1
K19_Forest_1.amplification K19_Forest_1.s1
K19_Forest_2.amplification K19_Forest_2.s1
K2_Domestic_1.amplification K2_Domestic_1.s1
K2_Domestic_2.amplification K2_Domestic_2.s1
K27_Forest_1.amplification K27_Forest_1.s1
K27_Forest_2.amplification K27_Forest_2.s1
K4_Domestic_1.amplification K4_Domestic_1.s1
K4_Domestic_2.amplification K4_Domestic_2.s1
T32_Domestic_1.amplification T32_Domestic_1.s1
T32_Domestic_2.amplification T32_Domestic_2.s1
U30_Forest_1.amplification U30_Forest_1.s1
U30_Forest_2.amplification U30_Forest_2.s1
16 items found, displaying all items.