Bioinformatics Resource for Invertebrate Vectors of Human Pathogens
RNA-Seq Experiment Antibiotic treatment of midgut microbiota during blood feeding (Rodgers et al., 2017)
NameAntibiotic treatment of midgut microbiota during blood feeding (Rodgers et al., 2017)
SpeciesAnopheles coluzzii
Experimental factorsCompound:Time:GrowthCondition
Statistical testsANOVA
DescriptionGut epithelial transcriptional response to changing microbiota load and blood feeding in Anopheles coluzzii.
AuthorsRodgers FH, Gendrin M, Wyer CAS, Christophides GK.
AffiliationsVector Immunogenomics and Infection Laboratory, Department of Life Sciences, Imperial College London, London, United Kingdom.
Accessions SRA: SRP106793
PubMed ID 28545061
Search expression data from this experiment
Genesets used
Geneset Description
Anopheles coluzzii AcolM1.4 transcripts Mali-NIH strain AcolM1.5 geneset.

Sequencing Runs
39 items found, displaying 1 to 20.[First/Prev] 1, 2 [Next/Last]
Name Samples
NBF-control-D.s1.e1.ampl NBF-control-D.s1
NBF-control-A.s1.e1.ampl NBF-control-A.s1
NBF-controlB.s1.e1.ampl NBF-controlB.s1
NBF-antibiotic-C.s1.e1.ampl NBF-antibiotic-C.s1
NBF-antibiotic-D.s1.e1.ampl NBF-antibiotic-D.s1
NBF-antibiotic-A.s1.e1.ampl NBF-antibiotic-A.s1
NBF-antibiotic-B.s1.e1.ampl NBF-antibiotic-B.s1
5hBF1-control-A.s1.e1.ampl 5hBF1-control-A.s1
5hBF1-control-B.s1.e1.ampl 5hBF1-control-B.s1
5hBF1-control-C.s1.e1.ampl 5hBF1-control-C.s1
5hBF1-control-D.s1.e1.ampl 5hBF1-control-D.s1
5hBF1-antibiotic-A.s1.e1.ampl 5hBF1-antibiotic-A.s1
5hBF1-antibiotic-B.s1.e1.ampl 5hBF1-antibiotic-B.s1
5hBF1-antibiotic-C.s1.e1.ampl 5hBF1-antibiotic-C.s1
5hBF1-antibiotic-D.s1.e1.ampl 5hBF1-antibiotic-D.s1
24hBF1-control-A.s1.e1.ampl 24hBF1-control-A.s1
24hBF1-control-B.s1.e1.ampl 24hBF1-control-B.s1
24hBF1-control-C.s1.e1.ampl 24hBF1-control-C.s1
24hBF1-control-D.s1.e1.ampl 24hBF1-control-D.s1
24hBF1-antibiotic-C.s1.e1.ampl 24hBF1-antibiotic-C.s1
39 items found, displaying 1 to 20.[First/Prev] 1, 2 [Next/Last]