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RNA-Seq Experiment Permethrin resistant Cyp-1 strain (Main et al., 2018)
NamePermethrin resistant Cyp-1 strain (Main et al., 2018)
SpeciesAnopheles coluzzii
Experimental factorsStrainOrLine:GrowthCondition
Statistical testsANOVA
DescriptionA study of genetic variations associated with permethrin resistance in Anopheles coluzzii. Cyp-1 resistant and susceptible Mopti mosquitoes were exposed to a sub-lethal dose of permethrin or an acetone control, the malpighian tubules were then extracted 4 hours post-exposure for sequencing.
AuthorsMain BJ, Everitt A, Cornel AJ, Hormozdiari F, Lanzaro GC
AffiliationsDepartment of Pathology, Microbiology, and Immunology, UC Davis, Davis, CA, 95616, USA. bradmain@gmail.com. Department of Pathology, Microbiology, and Immunology, UC Davis, Davis, CA, 95616, USA. Department of Entomology and Nematology, University of California, Davis, CA, 95616, USA. Department of Biochemistry and Molecular Medicine, MIND Institute and UC-Davis Genome Center, University of California, Davis, CA, 95616, USA.
Accessions SRA: SRP136253
PubMed ID 29618373
Search expression data from this experiment
Genesets used
Geneset Description
Anopheles coluzzii AcolM1.4 transcripts Mali-NIH strain AcolM1.5 geneset.

Sequencing Runs
24 items found, displaying 1 to 20.[First/Prev] 1, 2 [Next/Last]
Name Samples
Mopti-C1_R1.s1.e1.ampl Mopti-C1_R1.s1
Mopti-C1_R2.s1.e1.ampl Mopti-C1_R2.s1
cyp1-C1_R1.s1.e1.ampl cyp1-C1_R1.s1
cyp1-C1_R2.s1.e1.ampl cyp1-C1_R2.s1
Mopti-C2_R1.s1.e1.ampl Mopti-C2_R1.s1
Mopti-C2_R2.s1.e1.ampl Mopti-C2_R2.s1
cyp1-C2_R1.s1.e1.ampl cyp1-C2_R1.s1
cyp1-C2_R2.s1.e1.ampl cyp1-C2_R2.s1
Mopti-C3_R1.s1.e1.ampl Mopti-C3_R1.s1
Mopti-C3_R2.s1.e1.ampl Mopti-C3_R2.s1
cyp1-C3_R1.s1.e1.ampl cyp1-C3_R1.s1
cyp1-C3_R2.s1.e1.ampl cyp1-C3_R2.s1
Mopti-T1_R1.s1.e1.ampl Mopti-T1_R1.s1
Mopti-T1_R2.s1.e1.ampl Mopti-T1_R2.s1
cyp1-T1_R1.s1.e1.ampl cyp1-T1_R1.s1
cyp1-T1_R2.s1.e1.ampl cyp1-T1_R2.s1
Mopti-T2_R1.s1.e1.ampl Mopti-T2_R1.s1
Mopti-T2_R2.s1.e1.ampl Mopti-T2_R2.s1
cyp1-T2_R1.s1.e1.ampl cyp1-T2_R1.s1
cyp1-T2_R2.s1.e1.ampl cyp1-T2_R2.s1
24 items found, displaying 1 to 20.[First/Prev] 1, 2 [Next/Last]