AaegL5

The Aedes aegypti LVP_AGWG strain genome sequence was produced at Rockefeller University by the Aedes aegypti Genome Working Group (AGWG). PacBio reads were assembled by FALCON-Unzip, scaffolded by Hi-C, and gap-filling and polishing performed by PBJ and arrow. The assembly presented here (AaegL5.0 June 2017) is chromosome level, and consists of 2,310 scaffolds, totalling 1.278 Gigabases, with a contig N50 of 11.8 Mb and supercontig N50 size of 409.8 Mb.

The assembly effectively supercedes the AaegL3 assembly, and is the supported assembly for VectorBase.

Genome Size (bp): 
1,278,731,969
Scaffold N50 (bp): 
409 777 670
Scaffold count: 
2 310
Release date: 
Thursday, June 22, 2017
Strain: 

Liverpool AGWG

The Aedes aegypti Liverpool AGWG (LVP_AGWG) strain was sequenced as part of the Aedes aegypti Genome Working Group (AGWG) effort to improve the existing Liverpool strain

Gene sets

11 Dec 2017

Assembly Specific Downloads

 Downloads for this assembly