AgamP4.1

The AgamP4.1 geneset includes the following updates:

  • 30 new loci based on orthology across the sequenced 16 Anopheline genomes
  • Genes located on the mtDNA. This adds 13 protein coding genes, 22 tRNA and 2 rRNA genes.
  • Deletion of 10 duplicated predictions or unsupported isoforms.

Genes

Genes Protein-coding Other
13,624 12,843 781

Transcripts

Transcripts Protein-coding Other
15,478 14,697 781
Release date: 
30 Apr 2014
Assembly: 

AgamP4

As described in Holt et al. (2002), plasmid and BAC DNA libraries were constructed with stringently size-selected PEST strain DNA. Two BAC libraries were constructed, one (ND-TAM) using DNA from whole adult male and female mosquitoes and the other (ND-1) using DNA from ovaries of PEST females collected about 24 hours after the blood meal. Plasmid libraries containing inserts of 2.5, 10 and 50 kb were constructed with DNA derived from either 330 male or 430 female mosquitoes.