AquaS1.1

The Aqua1.1 geneset contains an update for the ncRNAs using the current Ensembl Genomes pipeline. No modifications of protein-coding loci were undertaken.

Genes

Genes Protein-coding Other
13,857 13,349 508

Transcripts

Transcripts Protein-coding Other
13,923 13,415 508
Release date: 
25 Feb 2014
Assembly: 

AquaS1

This assembly was generated using 101 bp paired-end Illumina HiSeq2000 reads generated from three libraries: a 180 bp insert ‘fragment’ library, a 1.5 kb ‘jump’ library, and a 38 kb ‘fosill’ library. Sequencing template for the fragment and jump libraries was derived from genomic DNA extracted from a single individual, which was preserved by freezing at -80C. Native genomic DNA was used for the fragment library and whole genome amplified DNA was used for the jump library. Template for the fosill library was generated from a pooled extraction of many individuals.